Discover your unique microbiome profile with advanced testing

Learn More →
Bacterium

Mycoplasma genitalium

Common name: Mgen

Harmful Systemic Urogenital
Harmful
Effect
Systemic
Impact
Urogenital
Location
Rare
Prevalence
Last reviewed: September 24, 2026

Sexually transmitted bacterium that causes urethritis in men and cervicitis and pelvic inflammatory disease in women; rapidly rising antibiotic resistance complicates treatment

Prevalence: Sexually transmitted; asymptomatic infections are frequent, and it accounts for an estimated 10-35% of non-chlamydial, non-gonococcal urethritis in men

Overview

Mycoplasma genitalium is a sexually transmitted bacterium that has moved, over the past two decades, from a research curiosity to a recognized cause of genital tract disease. It is now included in U.S. STI treatment guidelines.[1] It is spread through direct mucosal contact, frequently causes no symptoms, and is often missed because it cannot be detected with routine tests.[2]

Two features make it clinically important. It causes a meaningful share of urethritis and cervicitis that tests negative for chlamydia and gonorrhea. It has also developed antibiotic resistance at a striking pace, which makes accurate diagnosis and resistance-guided treatment increasingly important.

It is not the same as Ureaplasma or Mycoplasma hominis. Those are close relatives that are commonly carried without causing disease, and guidelines advise against routinely testing for them.

Classification

  • Phylum: Mycoplasmatota (historically Tenericutes)
  • Family: Mycoplasmataceae
  • Genus: Mycoplasma
  • Species: M. genitalium

M. genitalium was first identified in the early 1980s. It is a relative of Mycoplasma pneumoniae, a common cause of respiratory infection. Like all mycoplasmas, it lacks a cell wall, and it has one of the smallest genomes of any self-replicating organism.[3]

Key Characteristics

  1. No cell wall. Beta-lactam antibiotics such as penicillin have no effect, which narrows the treatment options.
  2. Slow growth and hard to culture. Culture can take weeks or months. Detection relies on nucleic acid amplification tests (NAATs).[3]
  3. Adhesion and motility. It attaches to and glides across epithelial cells using a specialized tip structure, which helps it colonize the urogenital tract.[3]
  4. Frequent silent infection. Many infections produce no symptoms, which allows ongoing transmission.[2]

Health Significance

In men

M. genitalium contributes to an estimated 10–35% of non-chlamydial, non-gonococcal urethritis in men. Symptoms typically include burning on urination and urethral discharge.[2] It has also been linked to balanoposthitis, chronic prostatitis, and acute epididymitis.[3]

In women

In women, M. genitalium is associated with cervicitis and pelvic inflammatory disease (PID). Symptoms can include vaginal discharge, burning on urination, and, with PID, pelvic pain and pain during sex.[2] A meta-analysis quantified the associations with reproductive tract outcomes:[4]

Outcome Pooled odds ratio (95% CI)
Cervicitis 1.66 (1.35–2.04)
Pelvic inflammatory disease 2.14 (1.31–3.49)
Preterm birth 1.89 (1.25–2.85)
Spontaneous abortion 1.82 (1.10–3.03)
Infertility 2.43 (0.93–6.34)

The association with infertility did not reach statistical significance in the main analysis, although all associations were stronger once coinfections were accounted for.[4]

Antibiotic Resistance: The Defining Problem

M. genitalium acquires resistance quickly. A systematic review of 59 studies from 21 countries found that mutations associated with macrolide resistance were present in 35.5% of samples overall. Prevalence rose from 10.0% before 2010 to 51.4% in 2016–2017.[5] Resistance to fluoroquinolones such as moxifloxacin, the main second-line option, is also rising.[2]

This is why guidelines emphasize that diagnosis should include testing for macrolide resistance mutations where available.[2]

Testing and Treatment

Who should be tested. Testing is aimed at people with symptoms. CDC's 2021 guidelines do not recommend screening for asymptomatic M. genitalium infection in men or women.[1]

How treatment works. Treatment is typically sequential. Doxycycline is given first; on its own it cures only about 30–40% of infections, but it lowers the bacterial load and may reduce the chance of selecting for macrolide resistance.[2] It is followed by a second antibiotic chosen by resistance status:[1]

  • Macrolide-sensitive strain: doxycycline followed by azithromycin. Azithromycin cures about 85–95% of macrolide-susceptible infections.[2]
  • Macrolide-resistant strain, or no resistance testing available: doxycycline followed by moxifloxacin.

A test of cure and partner evaluation may be recommended. Treatment decisions belong with a clinician; incomplete or mismatched courses can drive further resistance.

How It Differs From Other Genital Infections

Symptoms of M. genitalium overlap with Chlamydia trachomatis and Neisseria gonorrhoeae infections, as well as with vaginal conditions such as bacterial vaginosis. Because these conditions require different treatments, testing — not symptoms alone — determines the cause. For the broader context of vaginal and urinary health, see our women's vaginal and urinary health protocol.

When to See a Clinician

Seek evaluation for urethral or abnormal vaginal discharge, burning with urination, pelvic pain, pain during sex, or bleeding after sex. It is especially important if symptoms persist or return after treatment for chlamydia or gonorrhea. Tell your clinician if a partner has been diagnosed with M. genitalium.

This page is for educational purposes and is not medical advice. Diagnosis and treatment of sexually transmitted infections should be guided by a qualified healthcare provider.

Related Organisms

Frequently Asked Questions

What are the symptoms of Mycoplasma genitalium?

Many infections cause no symptoms. In men, the most common symptoms are urethritis with burning on urination and discharge. In women, symptoms can include abnormal vaginal discharge, burning on urination, and, if pelvic inflammatory disease develops, pelvic pain and pain during sex.

Should I get tested for Mycoplasma genitalium if I have no symptoms?

Generally no. CDC's 2021 guidelines state that screening for asymptomatic M. genitalium infection in women and men is not recommended. Testing is aimed at people with symptoms, such as persistent or recurrent urethritis or cervicitis, or pelvic inflammatory disease.

How is Mycoplasma genitalium treated?

Treatment is usually two stages: a course of doxycycline to reduce the bacterial load, followed by either azithromycin (if the strain is macrolide-sensitive) or moxifloxacin (if it is macrolide-resistant or resistance testing isn't available). Because resistance is common, testing for macrolide resistance helps guide the choice. Treatment should be directed by a clinician, and partners should also be evaluated.

Is Mycoplasma genitalium the same as Ureaplasma or Mycoplasma hominis?

No. All three are genital mycoplasmas, but M. genitalium is an established sexually transmitted pathogen, while Ureaplasma species and Mycoplasma hominis are commonly carried without disease. Guidelines recommend treating M. genitalium when detected in someone with symptoms, but advise against routine testing and treatment for Ureaplasma and M. hominis.

Research References

  1. Workowski KA, Bachmann LH, Chan PA, et al.. Sexually Transmitted Infections Treatment Guidelines, 2021. MMWR. Recommendations and Reports. 2021. doi:10.15585/mmwr.rr7004a1 ↩
  2. Jensen J, Cusini M, Gomberg M, Moi H, Wilson J, Unemo M. 2021 European guideline on the management of Mycoplasma genitalium infections. Journal of the European Academy of Dermatology and Venereology. 2022. doi:10.1111/jdv.17972 ↩
  3. Taylor-Robinson D, Jensen JS. Mycoplasma genitalium: from Chrysalis to Multicolored Butterfly. Clinical Microbiology Reviews. 2011. doi:10.1128/cmr.00006-11 ↩
  4. Lis R, Rowhani-Rahbar A, Manhart LE. Mycoplasma genitalium Infection and Female Reproductive Tract Disease: A Meta-analysis. Clinical Infectious Diseases. 2015. doi:10.1093/cid/civ312 ↩
  5. Machalek DA, Tao Y, Shilling H, et al.. Prevalence of mutations associated with resistance to macrolides and fluoroquinolones in Mycoplasma genitalium: a systematic review and meta-analysis. The Lancet Infectious Diseases. 2020. doi:10.1016/s1473-3099(20)30154-7 ↩